Staff

Ingrid Cifola

Ricercatore
E-Mail

ingrid.cifola@cnr.it

PHONE

+390226422705

LOCATION

Segrate

ROOM (floor/number)

7/25

I am a researcher with expertise in molecular biology, next-generation sequencing (NGS) and bioinformatics analysis of -omics data. My research activity focuses on human cancer genomics for translational medicine applications. Taking advantage of NGS technologies, I aim to perform -omics analyses in order to improve the comprehension of molecular mechanisms underlying tumorigenesis and to identify novel candidate biomarkers of clinical interest for precision medicine applications. Working in close cooperation with hospital and university research groups, I perform structural genomics studies for genome plasticity analysis in cancer cells and detailed characterization of large and complex chromosomal rearrangements, such as dmin and hsr. I also study cancer transcriptomics, with both bulk and single-cell sequencing technologies, for expression profiling of genes and microRNAs and for characterization of particular transcripts, such as fusion transcripts and circular RNAs. I address a special interest to the study of tumor extracellular vesicles as mediators in intercellular communication and with tumor microenvironment, and as novel liquid biopsy biomarkers for non-invasive tumor diagnosis and nanocarriers for targeted drug delivery.

Analysis of genome plasticity and structural genomics for characterization of extrachromosomal DNA markers and complex genomic rearrangements in cancer cells

Transcriptomic analysis of cancer cells, stem cells, organoids, human and murine tissues in disease models

Transcriptomic profiling of tumor extracellular vesicles (EVs) as intercellular communication mediators and for liquid biopsy and drug delivery applications

Sample and library preparation for high-throughput sequencing (bulk, single-cell, small and non-coding RNAs)

Analysis of transcriptome plasticity in cancer cells and characterization of fusion transcripts and circular RNAs

Long-read sequencing analyses in transcriptomic studies (transcriptional isoforms, complex splicing and structural variants)